** BANNER **
** BANNER END **
** MAIN **
** MAIN END **
** ADV **
- 유전체·전사체 정보의 통합 관리 시스템
- 유전체 브라우저 제공
- 키워드, 서열 등으로 원하는 정보 검색 가능
- 웹 기반의 BLAST 서열 유사성 탐색 기능
- 대용량 데이터의 다운로드 기능
- 관리자 기능 강화를 통한 사용자 보안 기능
** ADV END **
** FUNCTION **
주요 기능 소개
** FUNCTION IMG TABLE **
Genome database(incoGDB)
- Genome sequence data management, storage, and visualization
- Batch download
Genome browser
- Gene structure
- SNPs/ Expression/ Repeat elements
Expression
- Gene expression profiling
- DEGs viewing
** FUNCTION IMG TABLE END **
** FUNCTION END **
** RESEARCH-Ex **
적용 사례
incoGDB가 연구에서 어떤 역할을 하는지 확인해보세요.
Article
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Noh ES, Kang B-C, Kim J, Jeon J-H, Kim Y-O, Byun S-G, Kim W-J, Nam B-H. Draft Assembled Genome of Walleye Pollock (Gadus chalcogrammus). Front Marine. 2022 Feb 16;9:2022. doi: 10.3389/fmars.2022.744941
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Shin Y, Noh ES, Jeon JH, Shin GH, Kim EM, Kim YO, Kim H, Jung H, Nam BH. First Draft Genome of a Mud Loach (Misgurnus mizolepis) in the Family Cobitidae. Front Marin. 2022 Jan 3;8:1913. doi: 10.3389/fmars.2021.799148
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Song K, Shin Y, Jung M, Subramaniyam S, Lee KP, Oh EA, Jeong JH, Kim JG. Chromosome-Scale Genome Assemblies of Two Korean Cucumber Inbred Lines. Front Genet. 2021 Nov 19;12:733188. doi: 10.3389/fgene.2021.733188. PMID: 34868208; PMCID: PMC8640492.
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Graf L, Shin Y, Yang JH, Choi JW, Hwang IK, Nelson W, Bhattacharya D, Viard F, Yoon HS. A genome-wide investigation of the effect of farming and human-mediated introduction on the ubiquitous seaweed Undaria pinnatifida. Nat Ecol Evol. 2021 Mar;5(3):360-368. doi: 10.1038/s41559-020-01378-9. Epub 2021 Jan 25. PMID: 33495590; PMCID: PMC7929912.
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Lee JH, Jung M, Shin Y, Subramaniyam S, Kim IW, Seo M, Kim MA, Kim SH, Hwang J, Choi EH, Hwang UW, Hwang JS. Draft Genome of the Edible Oriental Insect Protaetia brevitarsis seulensis. Front Genet. 2021 Jan 13;11:593994. doi: 10.3389/fgene.2020.593994. PMID: 33519896; PMCID: PMC7838600.
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Liyanage DS, Oh M, Omeka WKM, Wan Q, Jin CN, Shin GH, Kang BC, Nam BH, Lee J. First Draft Genome Assembly of Redlip Mullet (Liza haematocheila) From Family Mugilidae. Front Genet. 2019 Dec 3;10:1246. doi: 10.3389/fgene.2019.01246. PMID: 31850083; PMCID: PMC6902644.
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Shin GH, Shin Y, Jung M, Hong JM, Lee S, Subramaniyam S, Noh ES, Shin EH, Park EH, Park JY, Kim YO, Choi KM, Nam BH, Park CI. First Draft Genome for Red Sea Bream of Family Sparidae. Front Genet. 2018 Dec 12;9:643. doi: 10.3389/fgene.2018.00643. PMID: 30619468; PMCID: PMC6299066.
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Shin Y, Jung M, Shin GH, Jung HJ, Baek SJ, Lee GY, Kang BC, Shim J, Hong JM, Park JY, An CM, Kim YO, Noh JK, Kim JW, Nam BH, Park CI. First draft genome sequence of the rock bream in the family Oplegnathidae. Sci Data. 2018 Oct 23;5:180234. doi: 10.1038/sdata.2018.234. PMID: 30351299; PMCID: PMC6198749.
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Lee J, Yang EC, Graf L, Yang JH, Qiu H, Zelzion U, Chan CX, Stephens TG, Weber APM, Boo GH, Boo SM, Kim KM, Shin Y, Jung M, Lee SJ, Yim HS, Lee JH, Bhattacharya D, Yoon HS. Analysis of the Draft Genome of the Red Seaweed Gracilariopsis chorda Provides Insights into Genome Size Evolution in Rhodophyta. Mol Biol Evol. 2018 Aug 1;35(8):1869-1886. doi: 10.1093/molbev/msy081. PMID: 29688518.
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Nam BH, Kwak W, Kim YO, Kim DG, Kong HJ, Kim WJ, Kang JH, Park JY, An CM, Moon JY, Park CJ, Yu JW, Yoon J, Seo M, Kim K, Kim DK, Lee S, Sung S, Lee C, Shin Y, Jung M, Kang BC, Shin GH, Ka S, Caetano-Anolles K, Cho S, Kim H. Genome sequence of pacific abalone (Haliotis discus hannai): the first draft genome in family Haliotidae. Gigascience. 2017 May 1;6(5):1-8. doi: 10.1093/gigascience/gix014. PMID: 28327967; PMCID: PMC5439488.