Bioinformatics Analysis
Collaborating with domestic and overseas professionals, we provide fast, highly reliable, and customizable biological analysis services to researchers and organizations.
A wide range of next-generation-sequencing (NGS)-based bioinformatics services are available, including genomic, transcriptomic, and variant analyses. We communicate research approaches with you to find the best way for your research.
60 bioinformatics professionals provide customized services with well-founded bioinformatics analysis pipelines and databases, collaborating with world-wide professional partners. Experience specialized services for producing and analyzing a broad range of challenging bioinformatics data, even including cutting-edge research tactics.
FIT
Variant analysis (WES, Targeted)
Gene expression profile (RNA-seq)
Gene set enrichment analysis
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CLC Genomics Workbench
QCI™ Interpret
Ingenuity® Pathway Analysis
OmicSoft Suite & Land
Functional variant analysis
Gene expression profile (RNA-seq)
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CLC Genomics Workbench
OmicsBox Genome Analysis
OmicsBox Transcriptomics
Gene structure and function annotation
Gene expression profile (RNA-seq)
16srRNA Taxonomy analysis
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CLC Genomics Workbench Premium
OmicsBox Functional Analysis
OmicsBox Metagenomics
Customized
De novo transcriptome assembly
Gene Expression profiling
DEG/Pattern analysis
GSEA analysis
Pathway analysis
Association study between promoters and transcripts
WGCNA
Potential SNPs detection
Potential SSRs analysis
Lineage marker development
Genetic marker development for breeding
Hereditary/disease associated SNP marker
Population structure analysis
Selective sweep analysis
Genomic selection analysis
Effective population size analysis
GWAS analysis
Marker development based on ML
Genome size estimation
De novo genome assembly
Repeat elements analysis
Structure gene prediction (Ab initio gene + Evidenced gene )
Protein function annotation
Long non-coding RNA analysis
Promoter prediction
Linkage map construction using GBS data
Ortholog analysis
Phylogeny analysis
Gene gain & loss analysis
Gene duplication analysis
Synteny analysis
Pangenome analysis
Epigenome analysis based on array/sequencing
Methylation/histone mark/miRNA analysis
DMR and pattern analysis
GSEA and pathway analysis
Comprehensive analysis of expression & regulation
Data Breeding
Effective Selective Breeding is feasible through data breeding.
Time to acquire economic trait will be reduced.
Optimal characteristics will be maintained through the simulation of crossbreeding.
Solutions
Phenotype-genotype integrated data analysis
Genotyping and SNP chip development
RIL population variants analysis
Elite variants analysis
Calculation of affinity in phylogeny
MBAC Marker Investigation
Group Analysis-PCA, STRUCTURE, Phylogeny
Construction of phenotype-genotype DB
Machine learning for trait prediction
Genotype-phenotype association marker search (GWAS/FST)
Calculation of heritability index for each marker
Establishment of a machine learning phenotype prediction model
Breeding simulation
Calculation of breeding value (GBLUB, ssBLUP, rrBLUP)
Calculation of valid group
Mating simulation and mating efficiency test
Representative Cases
- Initial response on protein medicine in human PBMC
- Transcriptome profiling for human sepsis
- Human brain tumor & senescence transcriptional association study
- Transcriptome and Pathway analysis on the ‘Korean beef’
- Genetically modified mouse(GEM) RNA-sequencing
- Discovery marker from Equus ferus caballus Transcriptome analysis
- Comparative transcriptomics between two Haliotis discus subspecies
- De novo transcriptome assembly of Frankliniella occidentalis
- piRNA/miRNA/small RNA Expression profile of Chicken
- Establishment of the EST information of Korean domestic canine
- Transcriptome analysis and discovery of novel AMP on Scolopendra subspinipes
- Discovery novel AMP and transcriptome analysis on the cockroach
- De novo transcriptome and DEG/pathway analysis on Valeriana fauriei
- Transcriptome profiling for marine fish with bacterial infection
- De novo transcriptome and functional DEGs/pathway analysis on the grass
- Leaf color gene expression profile on the rice
- Gene expression profile of the radiation effect on Arabidopsis thaliana
- Panax ginseng ESTs analysis
- De novo transcriptome assembly and DEG analysis on the Bostrychia
- Gene expression profile of Pleurotus ostreatus by developmental stage
- Gene expression difference between asexsual and sexual reproduction of the Fusarium sp
- Powdery mildew (fungus) genome analysis
- Senna tora genome analysis
- 8 fishes genome project (Epinephelus akaara, Thamnaconus modestus, Misgurnus mizolepis, Anguilla japonica, Hypomesus nipponensis,Theragra Chalcogramma, Platichthys stellatus, and Amphiprioninae)
- Development of liquid biopsy NGS pipelines and clinical reporting system
- Seawater/Freshwater Bivalvia genome project
- Haliotis discus hannai genome analysis
- Trombiculidae, factor of Scrub typhus, genome analysis
- Coturnix japonica genome analysis
- Minke whale genome analysis
- Analysis of the genomic sequence and variant of Chili pepper Cabbage genome analysis
- Gracilariopsis chorda(red algae) genome analysis , Gelidium vagum(red algae) genome analysis , Undaria pinnatifida genome analysis
- Xylaria(fungi) genome analysis
- Cochliobolus miyabeanus(Brown spot disease) genome analysis
- Phellinus linteus(Fungi) genome analysis
- Genome analysis for Hansenula polymorpha
- Comparative genomics among Fusarium subspecies
- Oplegnathus fasciatus, Sebastes schlegelii, Pagrus major and Chelon haematocheilus genome analysis
- Scolopendra subspinipes genome analysis
- Discovery of the genetic factor and mechanism for Papaver petal color
- Comparative genomics for HIV
- Identification of prediction markers for Platycodon grandiflorus
- Discovery of the early diagnostic markers of degenerative disease of a house dog
- Korean breast cancer WES analysis
- Discovery breed-classification markers of Chestnut
- Haliotis discus hannai(abalone) population study
- Undaria pinnatifida population study
- Discovery of Functional Gene and variant on ‘Korean beef’
- Variant analysis among Traditional chicken strains
- Coturnix japonica variant analysis among subspecies
- Caenorhabditis elegans comparative genome analysis using variants
- Methylation/mRNA/miRNA chip analysis on the breast and stomach cancer
- Variant analysis on Rice strains and discovery novel gene discovery
- Cabbage SNP marker selection
- Variant analysis among Chili pepper strains
- Discovery of the strain identification marker of Lettuce
- Discovery of the origin identification marker of milk vetch root
- Discovery of the species identification marker of Brucella
- Genome-enabled discovery of anthraquinone biosynthesis in Senna tora
- Expansion of alginate, ferredoxin, and transporter related gene families led to the evolution of brown algae in the Stramenopiles.
- Chromosome-Scale Genome Assemblies of Two Korean Cucumber Inbred Lines.
- Pangenome analysis with Enterococcus
- Epigenetic response for heat stress in Haliotis discus hannai
- The multi-omics analysis on ‘Korean beef’ (RNA/MBD-seq)
- The multi-omics analysis to discover a genetic effect of the Chinese medicine (RNA/Epic850k)
- Cancer Stem Cell(CSC) Histone CHIP-seq analysis
- Mouse WGBS analysis